Website with general information about Arabidopsis and functionalities such as a genomic viewer

Prefix
araport
Links
Homepage
Contact
Vivek Krishnakuma   0000-0002-5227-0200   vivekkrish
Pattern for Local Unique Identifiers

Local identifiers in Arabidopsis Information Portal should match this regular expression:
^AT.G[0-9]{5}$

Example Local Unique Identifier
AT5G05330   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Arabidopsis Information Portal should match this regular expression:
^araport:AT.G[0-9]{5}$

Example CURIE
araport:AT5G05330
Publications
2014 Araport: the Arabidopsis information portal
Metaregistry Arabidopsis Information Portal

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 5 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
Integbio Integbio logo integbio nbdc02433
Identifiers.org Identifiers.org logo miriam tair.name
NCBI National Center for Biotechnology Information Registry logo ncbi Araport
Pathguide Pathguide logo pathguide 768
UniProt UniProt Cross-ref database logo uniprot DB-0221
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier AT5G05330 is used to demonstrate the providers available for Arabidopsis Information Portal. A guide for curating additional providers can be found here.

Name Metaprefix URI
Arabidopsis Information Portal araport https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G05330
Bioregistry bioregistry https://bioregistry.io/araport:AT5G05330
Identifiers.org miriam https://identifiers.org/tair.name:AT5G05330