A resource for Dictyostelid discoideum (a soil-dwelling amoeba) genomics

Prefix
dictybase
Alternative Prefixes
dictyBase
Keywords
anatomy comparative genomics genome life science
Links
Homepage
Contact
Petra Fey   0000-0002-4532-2703   pfey03
Pattern for Local Unique Identifiers
Missing LUI pattern
Example Local Unique Identifier
DDB0191090   Resolve
Example CURIE
dictybase:DDB0191090
Publications
Ontology

A summary of the relations in the Bioregistry schema can be found here.

Has Parts (bfo:0000051 )
dictybase.est dictybase.gene
Metaregistry dictyBase

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for this resource with 5 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext dictyBase
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.4shj9c
GO Gene Ontology Registry logo go dictyBase
Integbio Integbio logo integbio nbdc00420
NCBI National Center for Biotechnology Information Registry logo ncbi dictyBase
Prefix Commons Prefix Commons logo prefixcommons dictybase
re3data Registry of Research Data Repositories logo re3data r3d100010586
UniProt UniProt Cross-ref database logo uniprot DB-0015
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier DDB0191090 is used to demonstrate the providers available for dictyBase. A guide for curating additional providers can be found here.

Name Metaprefix URI
dictyBase dictybase http://dictybase.org/gene/DDB0191090
Bioregistry bioregistry https://bioregistry.io/dictybase:DDB0191090
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/dictybase:DDB0191090