EcoliWiki is a wiki-based resource to store information related to non-pathogenic E. coli, its phages, plasmids, and mobile genetic elements. This collection references genes.

Prefix
ecoliwiki
Keywords
bioinformatics genomics life science ontology and terminology
Links
Homepage
Contact
Peter D. Karp   0000-0002-5876-6418   pkarp111
Pattern for Local Unique Identifiers

Local identifiers in EcoliWiki from EcoliHub should match this regular expression:
^[A-Za-z0-9-]+$

Example Local Unique Identifier
aaeA   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from EcoliWiki from EcoliHub should match this regular expression:
^ecoliwiki:[A-Za-z0-9-]+$

Example CURIE
ecoliwiki:aaeA
Publications
2009 What we can learn about Escherichia coli through application of Gene Ontology
Metaregistry EcoliWiki from EcoliHub

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext ECOLIWIKI
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.tx95wa
GO Gene Ontology Registry logo go EcoliWiki
Integbio Integbio logo integbio nbdc02041
Identifiers.org Identifiers.org logo miriam ecoliwiki
N2T Name-to-Thing logo n2t ecoliwiki
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier aaeA is used to demonstrate the providers available for EcoliWiki from EcoliHub. A guide for curating additional providers can be found here.

Name Metaprefix URI
EcoliWiki from EcoliHub ecoliwiki http://ecoliwiki.net/colipedia/index.php/aaeA:Gene
Bioregistry bioregistry https://bioregistry.io/ecoliwiki:aaeA
Identifiers.org miriam https://identifiers.org/ecoliwiki:aaeA
Name-to-Thing n2t https://n2t.net/ecoliwiki:aaeA