The integrated microbial genomes (IMG) system is a data management, analysis and annotation platform for all publicly available genomes. IMG contains both draft and complete JGI (DoE Joint Genome Institute) microbial genomes integrated with all other publicly available genomes from all three domains of life, together with a large number of plasmids and viruses. This datatype refers to gene information.

Prefix
img.gene
Keywords
gene genome
Links
Homepage
Contact
Nikos C. Kyrpides   0000-0002-6131-0462
Pattern for Local Unique Identifiers

Local identifiers in Integrated Microbial Genomes Gene should match this regular expression:
^\d+$

Example Local Unique Identifier
638309541   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Integrated Microbial Genomes Gene should match this regular expression:
^img\.gene:\d+$

Example CURIE
img.gene:638309541
Publications
2007 The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
Metaregistry Integrated Microbial Genomes Gene

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext IMG.GENE
Identifiers.org Identifiers.org logo miriam img.gene
N2T Name-to-Thing logo n2t img.gene
Prefix Commons Prefix Commons logo prefixcommons img.gene
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 638309541 is used to demonstrate the providers available for Integrated Microbial Genomes Gene. A guide for curating additional providers can be found here.

Name Metaprefix URI
Integrated Microbial Genomes Gene img.gene http://img.jgi.doe.gov/cgi-bin/w/main.cgi?section=GeneDetail&gene_oid=638309541
Bioregistry bioregistry https://bioregistry.io/img.gene:638309541
Identifiers.org miriam https://identifiers.org/img.gene:638309541
Name-to-Thing n2t https://n2t.net/img.gene:638309541
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/img.gene:638309541