iRefWeb is an interface to a relational database containing the latest build of the interaction Reference Index (iRefIndex) which integrates protein interaction data from ten different interaction databases: BioGRID, BIND, CORUM, DIP, HPRD, INTACT, MINT, MPPI, MPACT and OPHID. In addition, iRefWeb associates interactions with the PubMed record from which they are derived.

Prefix
irefweb
Keywords
interaction life science protein
Links
Homepage
Contact
Shoshana J. Wodak   0000-0002-0701-6545
Pattern for Local Unique Identifiers

Local identifiers in iRefWeb should match this regular expression:
^\d+$

Example Local Unique Identifier
617102   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from iRefWeb should match this regular expression:
^irefweb:\d+$

Example CURIE
irefweb:617102
Publications
2010 iRefWeb: interactive analysis of consolidated protein interaction data and their supporting evidence
Metaregistry iRefWeb

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext IREFWEB
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.t31wcb
Identifiers.org Identifiers.org logo miriam irefweb
N2T Name-to-Thing logo n2t irefweb
Pathguide Pathguide logo pathguide 300
Prefix Commons Prefix Commons logo prefixcommons irefweb
re3data Registry of Research Data Repositories logo re3data r3d100012725
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 617102 is used to demonstrate the providers available for iRefWeb. A guide for curating additional providers can be found here.

Name Metaprefix URI
iRefWeb irefweb http://wodaklab.org/iRefWeb/interaction/show/617102
Bioregistry bioregistry https://bioregistry.io/irefweb:617102
Identifiers.org miriam https://identifiers.org/irefweb:617102
Name-to-Thing n2t https://n2t.net/irefweb:617102
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/irefweb:617102