The PharmGKB database is a central repository for genetic, genomic, molecular and cellular phenotype data and clinical information about people who have participated in pharmacogenomics research studies. The data includes, but is not limited to, clinical and basic pharmacokinetic and pharmacogenomic research in the cardiovascular, pulmonary, cancer, pathways, metabolic and transporter domains.

Prefix
pharmgkb.disease
Keywords
pharmacogenomics
Links
Homepage
Contact
Teri E Klein   0000-0001-5527-6475   TeriKlein
Pattern for Local Unique Identifiers

Local identifiers in PharmGKB Disease should match this regular expression:
^PA\d+$

Example Local Unique Identifier
PA447218   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from PharmGKB Disease should match this regular expression:
^pharmgkb\.disease:PA\d+$

Example CURIE
pharmgkb.disease:PA447218
Publications
Ontology

A summary of the relations in the Bioregistry schema can be found here.

In Collection
Global Biodata Coalition - Global Core Biodata Resources
Metaregistry PharmGKB Disease

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext PHARMGKB.DISEASE
Biolink Biolink Model Registry logo biolink PHARMGKB.DISEASE
EDAM EDAM Ontology logo edam 2651
Identifiers.org Identifiers.org logo miriam pharmgkb.disease
N2T Name-to-Thing logo n2t pharmgkb.disease
Prefix Commons Prefix Commons logo prefixcommons pharmgkb.disease
Wikidata Wikidata Property logo wikidata P7001
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier PA447218 is used to demonstrate the providers available for PharmGKB Disease. A guide for curating additional providers can be found here.

Name Metaprefix URI
PharmGKB Disease pharmgkb.disease http://www.pharmgkb.org/disease/PA447218
Bioregistry bioregistry https://bioregistry.io/pharmgkb.disease:PA447218
Identifiers.org miriam https://identifiers.org/pharmgkb.disease:PA447218
Name-to-Thing n2t https://n2t.net/pharmgkb.disease:PA447218
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/pharmgkb.disease:PA447218