The number of known protein sequences exceeds those of experimentally solved protein structures. Homology (or comparative) modeling methods make use of experimental protein structures to build models for evolutionary related proteins. The Protein Model Portal (PMP) provides a single portal to access these models, which are accessed through their UniProt identifiers.

This resource is a provider. This means that while it may have its own prefix, it actually reuses the identifiers provided by the uniprot prefix. For all use cases, you should use uniprot instead of pmp.

Prefix
pmp
Keywords
prediction protein structure
Links
Homepage
Contact
Torsten Schwede   0000-0003-2715-335X
Pattern for Local Unique Identifiers

Local identifiers in Protein Model Portal should match this regular expression:
^([A-N,R-Z][0-9][A-Z][A-Z, 0-9][A-Z, 0-9][0-9])|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])$

Example Local Unique Identifier
Q0VCA6   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Protein Model Portal should match this regular expression:
^pmp:([A-N,R-Z][0-9][A-Z][A-Z, 0-9][A-Z, 0-9][0-9])|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])$

Example CURIE
pmp:Q0VCA6
Publications
2008 The Protein Model Portal
Ontology

A summary of the relations in the Bioregistry schema can be found here.

Provides
uniprot
Metaregistry Protein Model Portal

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext PMP
Identifiers.org Identifiers.org logo miriam pmp
N2T Name-to-Thing logo n2t pmp
Pathguide Pathguide logo pathguide 438
Prefix Commons Prefix Commons logo prefixcommons pmp
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier Q0VCA6 is used to demonstrate the providers available for Protein Model Portal. A guide for curating additional providers can be found here.

Name Metaprefix URI
Protein Model Portal pmp http://www.proteinmodelportal.org/query/uniprot/Q0VCA6
Bioregistry bioregistry https://bioregistry.io/pmp:Q0VCA6
Identifiers.org miriam https://identifiers.org/pmp:Q0VCA6
Name-to-Thing n2t https://n2t.net/pmp:Q0VCA6
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/pmp:Q0VCA6