Registry PRINTS compendium of protein fingerprints

PRINTS is a compendium of protein fingerprints. A fingerprint is a group of conserved motifs used to characterise a protein family; its diagnostic power is refined by iterative scanning of a SWISS-PROT/TrEMBL composite. Usually the motifs do not overlap, but are separated along a sequence, though they may be contiguous in 3D-space. Fingerprints can encode protein folds and functionalities more flexibly and powerfully than can single motifs, full diagnostic potency deriving from the mutual context provided by motif neighbours.

Prefix
prints
Alternative Prefixes
sprint
Keywords
biology domain protein structural biology
Links
Homepage
Contact
Teresa K. Attwood   0000-0003-2409-4235
Pattern for Local Unique Identifiers

Local identifiers in PRINTS compendium of protein fingerprints should match this regular expression:
^PR\d{5}$

Example Local Unique Identifier
PR00001   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from PRINTS compendium of protein fingerprints should match this regular expression:
^prints:PR\d{5}$

Example CURIE
prints:PR00001
Publications
Metaregistry PRINTS compendium of protein fingerprints

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for this resource with 5 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext PRINTS
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.h8r843
GO Gene Ontology Registry logo go PRINTS
Integbio Integbio logo integbio nbdc00039
Identifiers.org Identifiers.org logo miriam prints
N2T Name-to-Thing logo n2t prints
Prefix Commons Prefix Commons logo prefixcommons sprint
UniProt UniProt Cross-ref database logo uniprot DB-0082
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier PR00001 is used to demonstrate the providers available for PRINTS compendium of protein fingerprints. A guide for curating additional providers can be found here.

Name Metaprefix URI
PRINTS compendium of protein fingerprints prints http://www.bioinf.manchester.ac.uk/cgi-bin/dbbrowser/sprint/searchprintss.cgi?prints_accn=PR00001&display_opts=Prints&category=None&queryform=false&regexpr=off
Bioregistry bioregistry https://bioregistry.io/prints:PR00001
Identifiers.org miriam https://identifiers.org/prints:PR00001
Name-to-Thing n2t https://n2t.net/prints:PR00001
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/sprint:PR00001
prints.alt1 PRINTS Alt. 1 http://130.88.97.239/cgi-bin/dbbrowser/sprint/searchprintss.cgi?display_opts=Prints&category=None&queryform=false&regexpr=off&prints_accn=PR00001