ProDom is a database of protein domain families generated from the global comparison of all available protein sequences.

Prefix
prodom
Keywords
classification life science protein
Links
Homepage
Contact
Daniel Kahn   0000-0003-1644-0169
Pattern for Local Unique Identifiers

Local identifiers in ProDom should match this regular expression:
^PD\d+$

Example Local Unique Identifier
PD10000   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from ProDom should match this regular expression:
^prodom:PD\d+$

Example CURIE
prodom:PD10000
Publications
Metaregistry ProDom

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext PRODOM
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.a8z6gz
Integbio Integbio logo integbio nbdc00174
Identifiers.org Identifiers.org logo miriam prodom
N2T Name-to-Thing logo n2t prodom
Prefix Commons Prefix Commons logo prefixcommons prodom
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier PD10000 is used to demonstrate the providers available for ProDom. A guide for curating additional providers can be found here.

Name Metaprefix URI
ProDom prodom http://prodom.prabi.fr/prodom/current/cgi-bin/request.pl?question=DBEN&query=PD10000
Bioregistry bioregistry https://bioregistry.io/prodom:PD10000
Identifiers.org miriam https://identifiers.org/prodom:PD10000
Name-to-Thing n2t https://n2t.net/prodom:PD10000
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/prodom:PD10000