SABIO-RK is a relational database system that contains information about biochemical reactions, their kinetic equations with their parameters, and the experimental conditions under which these parameters were measured. The reaction data set provides information regarding the organism in which a reaction is observed, pathways in which it participates, and links to further information.

Prefix
sabiork.reaction
Alternative Prefixes
SABIO-RK
Keywords
biochemistry kinetics life science pathway reaction
Links
Homepage
Contact
Ulrike Wittig   0000-0002-9077-5664
Pattern for Local Unique Identifiers

Local identifiers in SABIO-RK Reaction should match this regular expression:
^\d+$

Example Local Unique Identifier
75   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from SABIO-RK Reaction should match this regular expression:
^sabiork\.reaction:\d+$

Example CURIE
sabiork.reaction:75
Publications
Metaregistry SABIO-RK Reaction

The metaregistry provides mappings between the Bioregistry and other registries. There are 9 mappings to external registries for this resource with 6 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext SABIORK.REACTION
EDAM EDAM Ontology logo edam 2309
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.cwx04e
Identifiers.org Identifiers.org logo miriam sabiork.reaction
N2T Name-to-Thing logo n2t sabiork.reaction
Pathguide Pathguide logo pathguide 226
Prefix Commons Prefix Commons logo prefixcommons sabiork.reaction
re3data Registry of Research Data Repositories logo re3data r3d100011052
UniProt UniProt Cross-ref database logo uniprot DB-0177
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 75 is used to demonstrate the providers available for SABIO-RK Reaction. A guide for curating additional providers can be found here.

Name Metaprefix URI
SABIO-RK Reaction sabiork.reaction http://sabiork.h-its.org/reacdetails.jsp?reactid=75
Bioregistry bioregistry https://bioregistry.io/sabiork.reaction:75
Identifiers.org miriam https://identifiers.org/sabiork.reaction:75
Name-to-Thing n2t https://n2t.net/sabiork.reaction:75
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/sabiork.reaction:75