The Saccharomyces Genome Database (SGD) project collects information and maintains a database of the molecular biology of the yeast Saccharomyces cerevisiae.

Prefix
sgd
Keywords
epigenetics eukaryotic genome life science nucleotide proteomics transcriptomics
License
CC-BY-4.0
Links
Homepage
Contact
J. Michael Cherry   0000-0001-9163-5180
Pattern for Local Unique Identifiers

Local identifiers in Saccharomyces Genome Database should match this regular expression:
^((S\d+$)|(Y[A-Z]{2}\d{3}[a-zA-Z](\-[A-Z])?))$

Example Local Unique Identifier
S000002493   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Saccharomyces Genome Database should match this regular expression:
^sgd:((S\d+$)|(Y[A-Z]{2}\d{3}[a-zA-Z](\-[A-Z])?))$

Example CURIE
sgd:S000002493
Publications
Ontology

A summary of the relations in the Bioregistry schema can be found here.

In Collection
Global Biodata Coalition - Global Core Biodata Resources
Metaregistry Saccharomyces Genome Database

The metaregistry provides mappings between the Bioregistry and other registries. There are 13 mappings to external registries for this resource with 7 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext SGD
EDAM EDAM Ontology logo edam 2632
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.pzvw40
GO Gene Ontology Registry logo go SGD
Integbio Integbio logo integbio nbdc00202
Identifiers.org Identifiers.org logo miriam sgd
N2T Name-to-Thing logo n2t sgd
NCBI National Center for Biotechnology Information Registry logo ncbi SGD
Prefix Commons Prefix Commons logo prefixcommons sgd
re3data Registry of Research Data Repositories logo re3data r3d100010419
TogoID togoid Sgd
UniProt UniProt Cross-ref database logo uniprot DB-0095
Wikidata Wikidata Property logo wikidata P3406
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier S000002493 is used to demonstrate the providers available for Saccharomyces Genome Database. A guide for curating additional providers can be found here.

Name Metaprefix URI
Saccharomyces Genome Database sgd https://www.yeastgenome.org/locus/S000002493
Bioregistry bioregistry https://bioregistry.io/sgd:S000002493
Identifiers.org miriam https://identifiers.org/sgd:S000002493
Name-to-Thing n2t https://n2t.net/sgd:S000002493
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
CURATOR_REVIEW Bio2RDF http://sgd.bio2rdf.org/describe/?url=http://bio2rdf.org/sgd:S000002493
agr SGD through the Alliance of Genome Resources https://www.alliancegenome.org/gene/SGD:S000002493
bio2rdf Bio2RDF http://bio2rdf.org/sgd:S000002493