SitEx is a database containing information on eukaryotic protein functional sites. It stores the amino acid sequence positions in the functional site, in relation to the exon structure of encoding gene This can be used to detect the exons involved in shuffling in protein evolution, or to design protein-engineering experiments.

Prefix
sitex
Keywords
domain eukaryotic life science sequence structure
Links
Homepage
Contact
Irina Medvedeva   0000-0003-2802-8198   imedvedeva-celgene
Pattern for Local Unique Identifiers

Local identifiers in SitEx should match this regular expression:
^\d+$

Example Local Unique Identifier
1000   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from SitEx should match this regular expression:
^sitex:\d+$

Example CURIE
sitex:1000
Publications
2011 SitEx: a computer system for analysis of projections of protein functional sites on eukaryotic genes
Metaregistry SitEx

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext SITEX
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.5mr9c5
Identifiers.org Identifiers.org logo miriam sitex
N2T Name-to-Thing logo n2t sitex
Prefix Commons Prefix Commons logo prefixcommons sitex
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 1000 is used to demonstrate the providers available for SitEx. A guide for curating additional providers can be found here.

Name Metaprefix URI
SitEx sitex http://www-bionet.sscc.ru/sitex/index.php?siteid=1000
Bioregistry bioregistry https://bioregistry.io/sitex:1000
Identifiers.org miriam https://identifiers.org/sitex:1000
Name-to-Thing n2t https://n2t.net/sitex:1000
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/sitex:1000