TopFIND is a database of protein termini, terminus modifications and their proteolytic processing in the species: Homo sapiens, Mus musculus, Arabidopsis thaliana, Saccharomyces cerevisiae and Escherichia coli.

This resource is a provider. This means that while it may have its own prefix, it actually reuses the identifiers provided by the uniprot prefix. For all use cases, you should use uniprot instead of topfind.

Prefix
topfind
Keywords
life science
Links
Homepage
Contact
Christopher M. Overall   0000-0001-5844-2731
Pattern for Local Unique Identifiers

Local identifiers in TopFind should match this regular expression:
^([A-N,R-Z][0-9][A-Z][A-Z, 0-9][A-Z, 0-9][0-9])|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])$

Example Local Unique Identifier
Q9UKQ2   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from TopFind should match this regular expression:
^topfind:([A-N,R-Z][0-9][A-Z][A-Z, 0-9][A-Z, 0-9][0-9])|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])$

Example CURIE
topfind:Q9UKQ2
Publications
Ontology

A summary of the relations in the Bioregistry schema can be found here.

Provides
uniprot
Metaregistry TopFind

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext TOPFIND
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.rkpmhn
Identifiers.org Identifiers.org logo miriam topfind
N2T Name-to-Thing logo n2t topfind
re3data Registry of Research Data Repositories logo re3data r3d100012721
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier Q9UKQ2 is used to demonstrate the providers available for TopFind. A guide for curating additional providers can be found here.

Name Metaprefix URI
TopFind topfind http://clipserve.clip.ubc.ca/topfind/proteins/Q9UKQ2
Bioregistry bioregistry https://bioregistry.io/topfind:Q9UKQ2
Identifiers.org miriam https://identifiers.org/topfind:Q9UKQ2
Name-to-Thing n2t https://n2t.net/topfind:Q9UKQ2